Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6031

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6030: 14398 - KOG4036 Uncharacterized conserved protein, at 1482702 to 1483838 14398 mRNA_6031: 14399 - KOG2890 Predicted membrane protein, at 1484173 to 1485684 14399 mRNA_6032: 14400 - Hypothetical Protein, at 1486205 to 1487772 14400

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,483,212 - 14398 mRNA_6030 0.45 -1.3
1,483,340 + 14398 mRNA_6030 0.56 -0.6
1,483,765 - -0.9
1,484,063 + 1.4
1,484,064 - -1.2
1,484,076 - 0.7
1,484,079 - 0.6
1,484,087 + -0.6
1,484,092 - 0.4
1,484,093 - -1.0
1,484,372 + 14399 mRNA_6031 0.13 -0.2
1,484,394 + 14399 mRNA_6031 0.15 1.2
1,484,488 - 14399 mRNA_6031 0.21 -0.7
1,484,732 - 14399 mRNA_6031 0.37 -0.8
1,484,812 + 14399 mRNA_6031 0.42 1.1
1,484,814 - 14399 mRNA_6031 0.42 0.3
1,484,962 - 14399 mRNA_6031 0.52 -3.5
1,485,019 - 14399 mRNA_6031 0.56 3.0
1,485,150 - 14399 mRNA_6031 0.65 -0.9
1,485,592 - 0.6
1,485,709 + 0.1
1,485,818 + -0.6
1,485,822 + -0.9
1,485,850 - -1.2
1,485,979 - 0.3
1,485,987 - -1.1
1,486,004 + -1.7
1,486,138 - 0.0
1,486,239 + 0.7
1,486,331 - 0.4
1,486,332 + 0.1
1,486,422 + 14400 mRNA_6032 0.14 -0.9
1,486,425 + 14400 mRNA_6032 0.14 -0.2
1,486,464 + 14400 mRNA_6032 0.17 -1.3
1,486,477 - 14400 mRNA_6032 0.17 -0.3
1,486,480 - 14400 mRNA_6032 0.18 2.6
1,486,541 + 14400 mRNA_6032 0.21 -1.8
1,486,596 - 14400 mRNA_6032 0.25 0.1