Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5981

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5980: 14348 - K12592 C1D, LRP1 exosome complex protein LRP1, at 1370321 to 1371409 14348 mRNA_5981: 14349 - Hypothetical Protein, at 1371994 to 1372598 14349 mRNA_5982: 14350 - KOG0379 Kelch repeat-containing proteins, at 1373446 to 1378307 14350

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,370,997 - 14348 mRNA_5980 0.62 -0.1
1,371,557 + -0.1
1,371,719 + 0.7
1,371,743 + 3.5
1,371,765 + 0.8
1,371,767 - -0.5
1,371,887 - 0.2
1,372,061 + 14349 mRNA_5981 0.11 -1.8
1,372,358 - 14349 mRNA_5981 0.60 0.1
1,372,483 + 14349 mRNA_5981 0.81 0.9
1,372,585 + -0.6
1,372,656 + 0.5
1,372,721 + -1.2
1,372,777 - 0.2
1,372,798 + -0.5
1,372,963 - 1.1