Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5841

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5840: 14208 - Hypothetical Protein, at 1060161 to 1062503 14208 mRNA_5841: 14209 - KOG1577 Aldo/keto reductase family proteins, at 1062734 to 1064125 14209 mRNA_5842: 14210 - K04508 TBL1 transducin (beta)-like 1, at 1064235 to 1067284 14210

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,061,788 + 14208 mRNA_5840 0.69 0.8
1,062,494 + -1.8
1,062,617 - 1.2
1,062,626 + 2.0
1,062,654 - 0.6
1,062,699 - -0.3
1,062,933 - 14209 mRNA_5841 0.14 0.6
1,062,935 - 14209 mRNA_5841 0.14 0.1
1,062,952 - 14209 mRNA_5841 0.16 1.3
1,063,094 - 14209 mRNA_5841 0.26 -1.0
1,063,097 + 14209 mRNA_5841 0.26 -2.5
1,063,099 + 14209 mRNA_5841 0.26 -2.1
1,063,105 + 14209 mRNA_5841 0.27 0.5
1,063,107 + 14209 mRNA_5841 0.27 0.3
1,063,132 - 14209 mRNA_5841 0.29 0.0
1,063,249 + 14209 mRNA_5841 0.37 1.2
1,063,256 - 14209 mRNA_5841 0.38 0.1
1,063,274 - 14209 mRNA_5841 0.39 -2.5
1,063,520 + 14209 mRNA_5841 0.56 0.5
1,063,695 - 14209 mRNA_5841 0.69 0.8
1,063,808 + 14209 mRNA_5841 0.77 0.1
1,063,829 - 14209 mRNA_5841 0.79 0.6
1,063,861 + 14209 mRNA_5841 0.81 -0.5
1,063,869 - 14209 mRNA_5841 0.82 1.0
1,064,005 - 0.2
1,064,300 + -0.4
1,064,464 + 2.5
1,064,642 + 14210 mRNA_5842 0.13 -0.2
1,064,711 + 14210 mRNA_5842 0.16 -0.8
1,065,017 - 14210 mRNA_5842 0.26 -0.0