Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5823

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5822: 14190 - SUPERFAMILY--SSF52047, at 1025817 to 1027407 14190 mRNA_5823: 14191 - SUPERFAMILY--SSF52047, at 1027877 to 1028999 14191 mRNA_5824: 14192 - Hypothetical Protein, at 1029924 to 1031060 14192

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,026,890 + 14190 mRNA_5822 0.67 0.1
1,027,051 + 14190 mRNA_5822 0.78 1.4
1,027,203 + 14190 mRNA_5822 0.87 0.4
1,027,301 - 0.2
1,027,347 + 0.4
1,027,476 + 0.1
1,027,492 + 0.1
1,027,612 - 0.1
1,027,615 - -1.1
1,027,665 - -0.5
1,027,789 - -0.3
1,028,066 - 14191 mRNA_5823 0.17 0.5
1,028,097 + 14191 mRNA_5823 0.20 -0.3
1,028,099 + 14191 mRNA_5823 0.20 0.1
1,028,392 + 14191 mRNA_5823 0.46 -0.8
1,028,440 - 14191 mRNA_5823 0.50 -0.0
1,028,550 - 14191 mRNA_5823 0.60 -1.6
1,028,661 - 14191 mRNA_5823 0.70 -0.7
1,028,838 - 14191 mRNA_5823 0.86 0.3
1,029,106 + -0.4
1,029,117 - -0.2
1,029,159 - -0.8
1,029,294 + 2.0
1,029,405 + 1.9
1,029,425 + -0.8
1,029,438 + -1.2
1,029,459 - 0.2
1,029,464 + -0.9
1,029,486 + 0.9
1,029,548 + -1.9
1,029,568 - -0.2
1,029,738 + -0.3
1,029,749 + 0.9
1,029,756 + -0.2
1,029,782 + 0.6
1,029,786 + -0.4
1,029,876 - 0.4