Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5822

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5821: 14189 - SUPERFAMILY--SSF52047, at 1023617 to 1025042 14189 mRNA_5822: 14190 - SUPERFAMILY--SSF52047, at 1025817 to 1027407 14190 mRNA_5823: 14191 - SUPERFAMILY--SSF52047, at 1027877 to 1028999 14191

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,024,967 - -0.6
1,024,981 - -0.2
1,024,987 + 1.6
1,025,425 - 3.5
1,025,449 + 1.9
1,025,459 + -0.0
1,025,468 + -0.5
1,025,471 + -0.0
1,025,749 + -2.3
1,025,892 + 1.2
1,026,180 - 14190 mRNA_5822 0.23 -0.2
1,026,189 + 14190 mRNA_5822 0.23 1.3
1,026,807 + 14190 mRNA_5822 0.62 2.2
1,026,890 + 14190 mRNA_5822 0.67 0.1
1,027,051 + 14190 mRNA_5822 0.78 1.4
1,027,203 + 14190 mRNA_5822 0.87 0.4
1,027,301 - 0.2
1,027,347 + 0.4
1,027,476 + 0.1
1,027,492 + 0.1
1,027,612 - 0.1
1,027,615 - -1.1
1,027,665 - -0.5
1,027,789 - -0.3
1,028,066 - 14191 mRNA_5823 0.17 0.5
1,028,097 + 14191 mRNA_5823 0.20 -0.3
1,028,099 + 14191 mRNA_5823 0.20 0.1
1,028,392 + 14191 mRNA_5823 0.46 -0.8