Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5805

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5804: 14172 - Hypothetical Protein, at 978003 to 978815 14172 mRNA_5805: 14173 - HMMPfam-Ion transport protein-PF00520,SUPERFAMILY--SSF81324, at 979008 to 980217 14173 mRNA_5806: 14174 - KOG4197 FOG PPR repeat, at 980969 to 985772 14174

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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978,141 + 14172 mRNA_5804 0.17 2.3
978,609 - 14172 mRNA_5804 0.75 -2.3
979,464 + 14173 mRNA_5805 0.38 -0.1
979,655 - 14173 mRNA_5805 0.53 0.6
979,728 + 14173 mRNA_5805 0.60 0.2
979,740 + 14173 mRNA_5805 0.60 -1.2
980,025 - 14173 mRNA_5805 0.84 0.8
980,274 - 3.3
980,277 - -3.6
980,312 + -1.3
980,312 + -1.6
980,326 - 1.2
980,334 - 1.0
980,457 - 0.9
980,743 + 0.1
980,946 + 3.3