Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5794

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5793: 14161 - K10581 UBE2O ubiquitin-conjugating enzyme E2 O, at 951477 to 955108 14161 mRNA_5794: 14162 - K01637 E4.1.3.1, aceA isocitrate lyase, at 955473 to 957559 14162 mRNA_5795: 14163 - KOG4842 Protein involved in sister chromatid separation and/or segregation, at 957855 to 959394 14163

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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955,083 + 0.4
955,213 + 0.2
955,361 + 3.1
955,365 - -1.7
955,370 + 0.6
955,442 + 1.1
955,505 - -0.0
955,541 - 1.5
955,553 - -1.5
955,693 + 14162 mRNA_5794 0.11 -1.1
955,696 - 14162 mRNA_5794 0.11 -0.6
955,696 + 14162 mRNA_5794 0.11 0.8
955,830 + 14162 mRNA_5794 0.17 0.4
956,161 + 14162 mRNA_5794 0.33 0.2
956,360 + 14162 mRNA_5794 0.43 1.8
956,477 + 14162 mRNA_5794 0.48 -0.4
956,572 - 14162 mRNA_5794 0.53 0.3
956,862 + 14162 mRNA_5794 0.67 -1.4
956,899 + 14162 mRNA_5794 0.68 -0.7
957,188 - 14162 mRNA_5794 0.82 -2.7
957,604 + 1.4
957,611 - -1.7
957,653 - -2.1
957,780 - -0.3
957,780 + 0.8
957,781 + -0.2
957,872 + -1.6
957,873 - -0.1
957,913 - 0.9
957,922 + -1.0
958,050 + 14163 mRNA_5795 0.13 -0.5
958,374 + 14163 mRNA_5795 0.34 0.3
958,534 - 14163 mRNA_5795 0.44 -0.0