Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5763

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5762: 14130 - SUPERFAMILY--SSF47095, at 884263 to 884826 14130 mRNA_5763: 14131 - HMMPfam-Lactonase, 7-bladed beta-propeller-PF10282,SUPERFAMILY--SSF51004, at 884981 to 886323 14131 mRNA_5764: 14132 - K07404 pgl 6-phosphogluconolactonase, at 886498 to 887807 14132

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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884,054 - -2.0
884,252 + -2.1
884,298 - 1.1
884,333 + 14130 mRNA_5762 0.12 1.6
884,496 - 14130 mRNA_5762 0.41 -1.1
884,655 + 14130 mRNA_5762 0.70 -1.3
884,769 - 14130 mRNA_5762 0.90 -1.2
884,782 - 0.4
884,795 - -3.5
884,795 - -1.0
884,801 + 0.8
885,080 - -1.6
885,252 + 14131 mRNA_5763 0.20 0.1
885,501 - 14131 mRNA_5763 0.39 -1.2
885,506 + 14131 mRNA_5763 0.39 1.2
885,522 - 14131 mRNA_5763 0.40 -0.2
885,528 + 14131 mRNA_5763 0.41 -0.8
885,834 + 14131 mRNA_5763 0.64 0.1
886,106 + 14131 mRNA_5763 0.84 0.1
886,107 + 14131 mRNA_5763 0.84 1.3
886,151 + 14131 mRNA_5763 0.87 -0.9
886,227 - 0.4
886,229 - -2.5
886,243 - -0.2
886,257 + 0.2
886,301 - -2.0
886,374 + -0.3
886,377 + -0.8
886,395 - 0.0
886,401 + -0.8
886,406 + -1.7
886,501 + -0.9
886,641 - 14132 mRNA_5764 0.11 -0.3
886,677 - 14132 mRNA_5764 0.14 0.7
886,763 + 14132 mRNA_5764 0.20 0.7
886,884 + 14132 mRNA_5764 0.29 -0.3
887,180 - 14132 mRNA_5764 0.52 1.3
887,265 + 14132 mRNA_5764 0.59 2.0
887,292 + 14132 mRNA_5764 0.61 0.7