Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5734

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5734: 14102 - K01183 E3.2.1.14 chitinase, at 805175 to 807034 14102 mRNA_5735: 14103 - K12828 SF3B1, SAP155 splicing factor 3B subunit 1, at 807499 to 811509 14103

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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804,229 - 0.4
804,344 - 0.0
804,686 + 0.7
804,785 - 0.5
805,079 - -0.3
805,082 + -1.1
805,216 - -1.5
805,956 + 14102 mRNA_5734 0.42 0.1
806,821 + 14102 mRNA_5734 0.88 0.9
807,100 + -0.6
807,111 - 0.1
807,116 + 1.3
807,233 - -0.5
807,245 + -1.2
807,257 - -0.3
807,405 - 0.5
807,409 - 0.1
807,412 + -1.3
807,415 - 0.4
807,421 + -0.2
807,425 + -2.1
807,434 - -0.6
807,435 + -0.1
807,475 + 0.5