Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5664

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5663: 14031 - K15441 TAD2, ADAT2 tRNA-specific adenosine deaminase 2, at 629473 to 630402 14031 mRNA_5664: 14032 - K01262 pepP Xaa-Pro aminopeptidase, at 630515 to 632715 14032

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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630,472 - -1.0
630,475 - 1.7
630,477 + -0.7
630,485 - 0.3
630,487 - -0.3
630,490 - 1.0
630,497 + -0.5
630,611 - -0.7
630,612 - 0.7
631,649 - 14032 mRNA_5664 0.52 -1.3
632,181 + 14032 mRNA_5664 0.76 -0.4
632,181 + 14032 mRNA_5664 0.76 1.1
632,325 - 14032 mRNA_5664 0.82 2.3
632,507 - 0.8
632,599 + -0.1
632,671 - 0.1
632,684 - 0.8
632,750 - -1.4
632,786 - 1.1
632,792 - -0.5
632,796 + -0.8
632,798 - 1.4
632,805 - 1.0
632,810 - 0.7
632,815 - 0.4
632,818 + -0.1
632,829 - 0.1
632,951 - 0.5
632,952 - 1.7
632,957 + -1.5
632,972 + 2.2
633,098 - -1.5
633,287 + 1.8
633,552 + 0.4
633,581 + 0.2