Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5639

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5638: 14006 - Hypothetical Protein, at 570923 to 572239 14006 mRNA_5639: 14007 - SUPERFAMILY--SSF52047, at 572457 to 573872 14007 mRNA_5640: 14008 - BLAST putative acyl- dehydrogenase [Moniliophthora rore..., at 574642 to 575900 14008

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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571,537 - 14006 mRNA_5638 0.47 0.1
571,544 + 14006 mRNA_5638 0.47 0.5
571,549 + 14006 mRNA_5638 0.48 -0.7
572,106 - 14006 mRNA_5638 0.90 -0.4
572,267 + -1.1
572,396 - -0.7
572,567 - -1.5
572,701 - 14007 mRNA_5639 0.17 0.3
572,730 + 14007 mRNA_5639 0.19 0.8
572,942 - 14007 mRNA_5639 0.34 0.3
573,142 + 14007 mRNA_5639 0.48 0.5
573,275 - 14007 mRNA_5639 0.58 -0.9
573,472 - 14007 mRNA_5639 0.72 0.0
573,568 - 14007 mRNA_5639 0.78 -1.2
573,851 - -0.0
573,859 + 0.8
574,045 - -0.3
574,158 - 1.9
574,168 - -1.8
574,174 + 1.6
574,177 - -0.7
574,315 - 0.3
574,336 + -0.3
574,448 + 1.8
574,468 - 1.2
574,475 + -0.4
574,477 + -0.3
574,534 - -0.3
574,605 + -0.7
574,605 - -0.9
574,790 + 14008 mRNA_5640 0.12 2.3