Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5625

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5624: 13992 - KOG1611 Predicted short chain-type dehydrogenase, at 535753 to 536555 13992 mRNA_5625: 13993 - KOG1611 Predicted short chain-type dehydrogenase, at 537330 to 538157 13993 mRNA_5626: 13994 - KOG1611 Predicted short chain-type dehydrogenase, at 538805 to 539634 13994

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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536,367 + 13992 mRNA_5624 0.76 0.7
536,534 - -2.5
536,556 - 0.1
536,711 - -0.8
536,812 - 0.3
536,866 - -0.3
537,093 - 1.2
537,144 + 0.1
537,160 + 1.3
537,194 - 0.7
537,562 - 13993 mRNA_5625 0.28 -1.5
538,008 - 13993 mRNA_5625 0.82 0.4
538,029 + 13993 mRNA_5625 0.84 0.4
538,095 + 1.0
538,188 - 1.0
538,540 + 0.6
538,895 - 13994 mRNA_5626 0.11 1.1