Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5624

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5623: 13991 - KOG3393 Predicted membrane protein, at 534281 to 535136 13991 mRNA_5624: 13992 - KOG1611 Predicted short chain-type dehydrogenase, at 535753 to 536555 13992 mRNA_5625: 13993 - KOG1611 Predicted short chain-type dehydrogenase, at 537330 to 538157 13993

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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534,914 - 13991 mRNA_5623 0.74 -2.0
534,951 - 13991 mRNA_5623 0.78 0.2
534,987 + 13991 mRNA_5623 0.82 -0.9
535,219 - 0.7
535,355 + -0.5
535,365 + 1.2
535,388 + -2.0
535,444 + -1.0
535,570 + -0.2
536,367 + 13992 mRNA_5624 0.76 0.7
536,534 - -2.5
536,556 - 0.1
536,711 - -0.8
536,812 - 0.3
536,866 - -0.3
537,093 - 1.2
537,144 + 0.1
537,160 + 1.3
537,194 - 0.7