Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5623

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5622: 13990 - K00849 galK galactokinase, at 531659 to 534063 13990 mRNA_5623: 13991 - KOG3393 Predicted membrane protein, at 534281 to 535136 13991 mRNA_5624: 13992 - KOG1611 Predicted short chain-type dehydrogenase, at 535753 to 536555 13992

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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533,322 - 13990 mRNA_5622 0.69 0.5
533,563 + 13990 mRNA_5622 0.79 0.2
533,727 + 13990 mRNA_5622 0.86 -0.3
534,012 + 1.6
534,155 + -0.8
534,158 - 1.3
534,346 - -2.1
534,423 - 13991 mRNA_5623 0.17 -0.3
534,738 - 13991 mRNA_5623 0.53 -0.2
534,914 - 13991 mRNA_5623 0.74 -2.0
534,951 - 13991 mRNA_5623 0.78 0.2
534,987 + 13991 mRNA_5623 0.82 -0.9
535,219 - 0.7
535,355 + -0.5
535,365 + 1.2
535,388 + -2.0
535,444 + -1.0
535,570 + -0.2