Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5565

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5565: 13933 - KOG3033 Predicted PhzC/PhzF-type epimerase, at 391659 to 392676 13933 mRNA_5566: 13934 - Hypothetical Protein, at 393012 to 395471 13934

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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390,768 - 0.2
391,031 + -0.4
391,042 - 1.3
391,195 + -0.2
391,195 + 0.3
391,305 + -0.4
391,306 + 2.9
391,319 - -0.1
391,326 + 0.4
391,328 - 1.4
391,343 - 0.4
391,381 - 0.1
391,401 + -0.3
391,401 + -2.4
391,419 - 0.2
391,420 - 0.2
391,438 + -1.3
391,447 - 0.9
391,454 - -0.7
391,454 - -0.1
391,465 + -2.3
391,472 - 0.3
391,484 + 1.2
391,488 - 0.3
391,498 + -1.0
391,505 - 1.6
391,508 + -1.5
391,622 - -1.1
391,634 - 1.9
391,635 - -0.6
391,653 - -0.3
391,947 - 13933 mRNA_5565 0.28 0.5
391,953 + 13933 mRNA_5565 0.29 -0.3
392,023 - 13933 mRNA_5565 0.36 -0.1
392,057 - 13933 mRNA_5565 0.39 1.7
392,071 - 13933 mRNA_5565 0.40 0.2
392,497 + 13933 mRNA_5565 0.82 0.0
392,511 + 13933 mRNA_5565 0.84 0.1
392,629 - -0.7
392,941 + -0.5
393,064 + 0.6
393,082 - -0.9
393,222 - 1.3
393,224 + 0.5
393,242 - 0.4
393,386 + 13934 mRNA_5566 0.15 -0.2
393,442 - 13934 mRNA_5566 0.17 -0.6