Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5561

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5560: 13928 - BLAST PROTEIN D2013.6 [Ceraceosorus bombacis], at 380962 to 381944 13928 mRNA_5561: 13929 - Hypothetical Protein, at 382634 to 383572 13929 mRNA_5562: 13930 - KOG0257 Kynurenine aminotransferase, glutamine transaminase K, at 383773 to 385239 13930

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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381,927 + -1.0
382,093 - -0.1
382,263 + -0.3
382,330 + 0.2
382,902 - 13929 mRNA_5561 0.29 -3.0
383,142 - 13929 mRNA_5561 0.54 0.9
383,376 + 13929 mRNA_5561 0.79 -0.3
383,408 - 13929 mRNA_5561 0.82 1.8
383,538 + -0.4
383,568 - 0.5
383,579 + -1.5
383,626 - 1.4
383,642 - 0.6
383,694 + -1.2
383,993 + 13930 mRNA_5562 0.15 2.0
384,002 - 13930 mRNA_5562 0.16 0.0
384,252 + 13930 mRNA_5562 0.33 -1.2
384,405 + 13930 mRNA_5562 0.43 -0.7
384,552 + 13930 mRNA_5562 0.53 1.2
384,555 - 13930 mRNA_5562 0.53 -1.2