Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5529

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5528: 13896 - HMMPfam-Protein of unknown function (DUF2416)-PF10315, at 305773 to 306425 13896 mRNA_5529: 13897 - K18045 SIW14, OCA3 tyrosine-protein phosphatase SIW14, at 306670 to 307631 13897

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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305,722 - -0.8
305,837 - -1.1
306,006 - 13896 mRNA_5528 0.36 1.3
306,125 - 13896 mRNA_5528 0.54 -0.1
306,134 - 13896 mRNA_5528 0.55 -0.4
306,170 + 13896 mRNA_5528 0.61 -0.1
306,292 - 13896 mRNA_5528 0.79 0.6
306,315 + 13896 mRNA_5528 0.83 1.7
306,341 - 13896 mRNA_5528 0.87 0.3
306,432 - 2.3
306,440 + 0.1
306,446 - -1.2
306,452 - 0.1
306,761 + 2.0
306,863 + 13897 mRNA_5529 0.20 0.2
307,175 + 13897 mRNA_5529 0.52 0.8
307,183 + 13897 mRNA_5529 0.53 -0.3
307,354 - 13897 mRNA_5529 0.71 0.8
307,663 + 0.5
307,674 + -2.3
307,768 + -0.4
307,789 - -0.3
307,811 + 0.2
307,907 + -0.1
307,923 + -1.1
308,040 - -0.2
308,075 - 0.2
308,086 + -0.7
308,092 - 0.3
308,095 - -0.3
308,098 + 2.5
308,108 - -0.0
308,218 - 0.3
308,235 - -0.6
308,239 + 0.9
308,420 + 0.5
308,513 - 1.6
308,521 + 2.3
308,524 + 1.1
308,525 - 1.4
308,534 - -0.7
308,543 - -0.1
308,543 + 0.6
308,554 + 0.3