Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5524

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5523: 13891 - ProSiteProfiles-Zinc finger RING-type profile.-PS50089,SUPERFAMILY--SSF57850, at 295158 to 296227 13891 mRNA_5524: 13892 - KOG3002 Zn finger protein, at 297072 to 298317 13892 mRNA_5525: 13893 - HMMPfam-Xyloglucan fucosyltransferase-PF03254, at 299170 to 301469 13893

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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296,121 + -1.3
296,149 - 1.0
296,414 - -0.5
296,607 - -1.7
296,701 - -0.8
296,835 - -1.2
296,850 + 0.3
296,866 - 1.6
296,866 - 0.1
296,875 + -0.5
297,011 - 0.3
297,140 - -2.0
297,286 + 13892 mRNA_5524 0.17 -0.7
297,287 + 13892 mRNA_5524 0.17 -0.1
297,293 + 13892 mRNA_5524 0.18 -1.0
297,406 - 13892 mRNA_5524 0.27 0.6
297,426 - 13892 mRNA_5524 0.28 1.7
297,426 - 13892 mRNA_5524 0.28 -0.9
297,482 + 13892 mRNA_5524 0.33 -0.1
297,900 + 13892 mRNA_5524 0.66 -1.9
298,099 - 13892 mRNA_5524 0.82 1.1
298,102 - 13892 mRNA_5524 0.83 -1.0
298,175 - 13892 mRNA_5524 0.89 -0.0
298,317 + -0.0
298,500 + 1.2
298,517 + 2.1
298,646 + 1.4
298,934 + 0.6
299,046 - -0.0
299,058 - 0.3
299,061 + 0.4
299,071 + 0.1
299,071 + 0.6
299,071 + 0.6
299,074 + -0.4
299,120 - 0.5
299,128 - -0.3
299,257 - -0.7
299,264 - 0.2
299,278 - 0.3