Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5466

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5465: 13833 - Hypothetical Protein, at 156189 to 157604 13833 mRNA_5466: 13834 - K05841 E2.4.1.173 sterol 3beta-glucosyltransferase, at 157808 to 163476 13834

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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157,124 - 13833 mRNA_5465 0.66 -1.2
157,294 + 13833 mRNA_5465 0.78 0.7
157,560 - 0.6
157,561 + -0.8
158,158 + 2.4
158,223 - -0.9
158,350 + -0.8
158,450 + 13834 mRNA_5466 0.11 0.3
158,683 + 13834 mRNA_5466 0.15 -1.6
158,807 - 13834 mRNA_5466 0.18 0.5
158,870 + 13834 mRNA_5466 0.19 1.1
159,108 - 13834 mRNA_5466 0.23 -1.0
159,158 - 13834 mRNA_5466 0.24 -0.7
159,233 + 13834 mRNA_5466 0.25 -0.6
159,246 + 13834 mRNA_5466 0.25 0.2
159,326 + 13834 mRNA_5466 0.27 -1.1
159,530 - 13834 mRNA_5466 0.30 -0.8
159,707 - 13834 mRNA_5466 0.33 -0.5
159,892 - 13834 mRNA_5466 0.37 0.8
160,120 - 13834 mRNA_5466 0.41 0.6
160,298 - 13834 mRNA_5466 0.44 -1.3
160,319 + 13834 mRNA_5466 0.44 -1.1
160,396 - 13834 mRNA_5466 0.46 -1.1
161,096 + 13834 mRNA_5466 0.58 1.0
161,171 - 13834 mRNA_5466 0.59 0.5
161,203 + 13834 mRNA_5466 0.60 -1.3
161,330 - 13834 mRNA_5466 0.62 1.2
161,457 + 13834 mRNA_5466 0.64 -0.7
161,478 + 13834 mRNA_5466 0.65 0.7
161,599 - 13834 mRNA_5466 0.67 0.9
161,798 - 13834 mRNA_5466 0.70 1.6
161,804 + 13834 mRNA_5466 0.70 0.5
161,816 + 13834 mRNA_5466 0.71 1.6
162,046 + 13834 mRNA_5466 0.75 1.6
162,061 + 13834 mRNA_5466 0.75 1.2
162,102 + 13834 mRNA_5466 0.76 -1.1
162,387 - 13834 mRNA_5466 0.81 -0.6
162,938 - 1.6
163,068 + 0.1
163,075 + 0.6
163,119 + -1.0
163,220 + -0.7
163,377 - 1.7
163,385 - -1.0
163,386 + 1.8
163,413 - 0.4
163,479 - -1.0
163,521 + -0.0
163,523 + 1.6
163,676 + 0.8
163,680 + -0.2
163,692 + 2.0
163,699 + 1.6
163,809 + -1.6
163,818 + 1.1
163,831 + 1.5
163,835 - -0.1
163,855 - 0.0
163,857 - 2.1
163,863 + 1.0
163,943 - 0.7
163,961 + -1.0
163,992 + -1.0
163,997 + -0.2
163,998 + -0.8
164,407 - -0.8