Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5465

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5464: 13832 - K09579 PIN4 peptidyl-prolyl cis-trans isomerase NIMA-interacting 4, at 155001 to 155781 13832 mRNA_5465: 13833 - Hypothetical Protein, at 156189 to 157604 13833 mRNA_5466: 13834 - K05841 E2.4.1.173 sterol 3beta-glucosyltransferase, at 157808 to 163476 13834

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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156,008 - 0.7
156,127 + -1.5
156,290 - -2.3
156,424 + 13833 mRNA_5465 0.17 -0.5
157,124 - 13833 mRNA_5465 0.66 -1.2
157,294 + 13833 mRNA_5465 0.78 0.7
157,560 - 0.6
157,561 + -0.8
158,158 + 2.4
158,223 - -0.9
158,350 + -0.8
158,450 + 13834 mRNA_5466 0.11 0.3