Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5460

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5459: 13827 - K11274 WDHD1, CTF4 chromosome transmission fidelity protein 4, at 137712 to 142307 13827 mRNA_5460: 13828 - Hypothetical Protein, at 142761 to 144304 13828 mRNA_5461: 13829 - KOG1721 FOG Zn-finger, at 144867 to 148106 13829

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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142,477 + 0.2
142,482 + -1.0
142,486 + -0.8
142,658 + -0.6
142,678 + -1.9
142,801 + 0.3
143,078 + 13828 mRNA_5460 0.21 -0.4
143,528 + 13828 mRNA_5460 0.50 -0.3
143,807 - 13828 mRNA_5460 0.68 1.0
143,902 - 13828 mRNA_5460 0.74 -0.0
144,828 - 0.5
144,832 - 1.0
144,939 + -1.9
145,112 - 1.4
145,132 - 0.9
145,133 + 0.3
145,301 - 13829 mRNA_5461 0.13 1.6