Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5427

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5426: 13794 - K06944 K06944 uncharacterized protein, at 72728 to 74932 13794 mRNA_5427: 13795 - Hypothetical Protein, at 75255 to 76663 13795 mRNA_5428: 13796 - KOG0157 Cytochrome P450 CYP4/CYP19/CYP26 subfamilies, at 77473 to 79440 13796

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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74,262 + 13794 mRNA_5426 0.70 -0.2
74,382 - 13794 mRNA_5426 0.75 -1.1
74,603 + 13794 mRNA_5426 0.85 -1.2
74,712 + 0.8
74,846 - -0.8
75,033 - -0.1
75,121 - 0.7
75,124 - 1.2
75,220 - -1.0
75,299 - -0.4
75,345 - -0.5
75,358 - 0.1
75,408 - 13795 mRNA_5427 0.11 0.8
75,436 - 13795 mRNA_5427 0.13 -0.5
75,568 + 13795 mRNA_5427 0.22 0.0
75,571 - 13795 mRNA_5427 0.22 -2.0
75,573 - 13795 mRNA_5427 0.23 0.6
75,666 - 13795 mRNA_5427 0.29 0.5
75,762 - 13795 mRNA_5427 0.36 -0.7
75,805 - 13795 mRNA_5427 0.39 0.5
76,161 + 13795 mRNA_5427 0.64 -0.1
76,165 - 13795 mRNA_5427 0.65 1.2
76,227 - 13795 mRNA_5427 0.69 1.3
76,446 - 13795 mRNA_5427 0.85 1.6
76,464 - 13795 mRNA_5427 0.86 -0.4
76,472 - 13795 mRNA_5427 0.86 0.4
76,578 - 1.3
76,596 + 0.5
76,811 + -0.3
76,868 + 1.1
77,130 + 1.4
77,150 + 0.1
77,154 + -0.5
77,162 + -0.2
77,299 - -1.4
77,313 + 2.0
77,316 - -0.5
77,321 - -0.2
77,343 + -1.5
77,454 - -0.7
77,483 + 0.5
77,512 + 0.8