Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5368

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5367: 13735 - K08838 STK24_25_MST4 serine/threonine-protein kinase 24/25/MST4, at 552284 to 555242 13735 mRNA_5368: 13736 - K09553 STIP1 stress-induced-phosphoprotein 1, at 555613 to 556991 13736 mRNA_5369: 13737 - K03627 MBF1 putative transcription factor, at 557510 to 559067 13737

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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554,823 + 13735 mRNA_5367 0.86 -1.4
555,013 + 0.3
555,105 - -0.1
555,156 - 1.0
555,322 - -0.7
555,454 + 0.8
555,881 + 13736 mRNA_5368 0.19 0.6
556,010 + 13736 mRNA_5368 0.29 -0.4
556,262 + 13736 mRNA_5368 0.47 -0.3
556,412 - 13736 mRNA_5368 0.58 -1.0
556,450 - 13736 mRNA_5368 0.61 1.4
556,733 - 13736 mRNA_5368 0.81 0.7
556,859 + -1.0
556,864 + -0.5
556,867 + 0.4
556,963 - 0.9
557,004 + 0.9
557,020 + 1.9
557,140 + -0.0
557,141 - -0.2
557,149 + -0.5
557,272 - -0.6
557,274 + 0.1
557,275 - 0.6
557,276 - -1.3
557,276 - 0.7
557,283 + -0.3
557,288 + -0.2
557,291 - -0.4
557,291 + 2.7
557,293 + -3.0
557,303 - 0.6
557,311 + 0.6