Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5356

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5355: 13723 - BLAST transmembrane protein, putative [Rhizoctonia solani A..., at 528970 to 530546 13723 mRNA_5356: 13724 - K07748 E1.1.1.170, NSDHL, ERG26 sterol-4alpha-carboxylate 3-dehydrogenase (decarboxylating), at 531177 to 533794 13724 mRNA_5357: 13725 - HMMPfam-Methyltransferase domain-PF12847,SUPERFAMILY--SSF53335, at 533948 to 534977 13725

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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530,182 - 13723 mRNA_5355 0.77 0.1
530,668 + 0.2
530,818 - -1.5
530,938 + -1.2
530,956 - 0.2
531,075 + -2.4
531,106 + -1.1
531,905 - 13724 mRNA_5356 0.28 -0.2
532,766 - 13724 mRNA_5356 0.61 2.9
532,822 - 13724 mRNA_5356 0.63 1.6
532,873 - 13724 mRNA_5356 0.65 0.5
532,874 + 13724 mRNA_5356 0.65 -0.6
532,876 - 13724 mRNA_5356 0.65 -2.1
532,887 - 13724 mRNA_5356 0.65 -1.8
532,893 + 13724 mRNA_5356 0.66 -1.0
532,894 - 13724 mRNA_5356 0.66 1.4
532,897 + 13724 mRNA_5356 0.66 -0.0
532,902 + 13724 mRNA_5356 0.66 0.7
532,904 - 13724 mRNA_5356 0.66 1.0
532,915 + 13724 mRNA_5356 0.66 -2.3
532,916 + 13724 mRNA_5356 0.66 -2.1
533,038 - 13724 mRNA_5356 0.71 -0.8
533,048 + 13724 mRNA_5356 0.71 2.2
533,132 - 13724 mRNA_5356 0.75 0.8
533,218 + 13724 mRNA_5356 0.78 0.6
533,229 - 13724 mRNA_5356 0.78 0.1
533,236 - 13724 mRNA_5356 0.79 0.7
533,240 + 13724 mRNA_5356 0.79 0.2
533,364 - 13724 mRNA_5356 0.84 -1.1
533,565 + -0.4
533,565 - -1.6
533,648 - -0.6
533,651 - 1.2
533,676 - -0.4
533,833 + -1.6
533,954 - 0.1
534,377 + 13725 mRNA_5357 0.42 0.2
534,442 + 13725 mRNA_5357 0.48 0.5
534,554 + 13725 mRNA_5357 0.59 0.1
534,670 - 13725 mRNA_5357 0.70 1.5
534,688 + 13725 mRNA_5357 0.72 -0.4