Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5346

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5345: 13713 - Hypothetical Protein, at 503371 to 504560 13713 mRNA_5346: 13714 - HMMPfam-Hamartin protein-PF04388, at 504794 to 508994 13714 mRNA_5347: 13715 - BLAST transmembrane protein, putative [Rhizoctonia solani A..., at 509884 to 511420 13715

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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504,687 + -1.0
504,814 + -0.3
504,990 - -1.3
504,998 + -1.4
505,227 + 13714 mRNA_5346 0.10 1.1
505,279 - 13714 mRNA_5346 0.12 0.2
505,302 + 13714 mRNA_5346 0.12 0.4
505,365 + 13714 mRNA_5346 0.14 0.7
505,410 - 13714 mRNA_5346 0.15 0.6
505,416 - 13714 mRNA_5346 0.15 0.3
505,422 - 13714 mRNA_5346 0.15 0.3
505,429 + 13714 mRNA_5346 0.15 1.0
505,439 - 13714 mRNA_5346 0.15 0.8
505,445 - 13714 mRNA_5346 0.15 -1.4
505,452 - 13714 mRNA_5346 0.16 0.7
505,455 + 13714 mRNA_5346 0.16 -1.0
505,469 + 13714 mRNA_5346 0.16 0.5
505,472 - 13714 mRNA_5346 0.16 -0.3
505,474 - 13714 mRNA_5346 0.16 -0.7
505,484 + 13714 mRNA_5346 0.16 1.1
505,488 + 13714 mRNA_5346 0.17 1.1
505,489 - 13714 mRNA_5346 0.17 0.8
505,490 + 13714 mRNA_5346 0.17 -0.4
505,491 - 13714 mRNA_5346 0.17 -0.2
505,492 - 13714 mRNA_5346 0.17 -1.0
505,494 + 13714 mRNA_5346 0.17 -1.1
505,495 + 13714 mRNA_5346 0.17 1.9
505,497 + 13714 mRNA_5346 0.17 -0.3
505,498 + 13714 mRNA_5346 0.17 0.1
505,499 - 13714 mRNA_5346 0.17 0.8
505,501 - 13714 mRNA_5346 0.17 0.1
505,504 - 13714 mRNA_5346 0.17 -0.9
505,541 + 13714 mRNA_5346 0.18 -1.0
505,544 + 13714 mRNA_5346 0.18 0.2
505,546 + 13714 mRNA_5346 0.18 -1.0
505,547 - 13714 mRNA_5346 0.18 -0.3
505,551 + 13714 mRNA_5346 0.18 0.7
505,551 - 13714 mRNA_5346 0.18 2.0
505,553 - 13714 mRNA_5346 0.18 0.3
505,554 - 13714 mRNA_5346 0.18 -0.7
505,558 + 13714 mRNA_5346 0.18 -0.8
505,559 - 13714 mRNA_5346 0.18 1.4
505,560 + 13714 mRNA_5346 0.18 1.2
505,564 + 13714 mRNA_5346 0.18 -0.9
505,564 - 13714 mRNA_5346 0.18 -0.3
505,566 - 13714 mRNA_5346 0.18 -1.4
505,567 + 13714 mRNA_5346 0.18 -0.3
505,572 + 13714 mRNA_5346 0.19 0.4
505,574 + 13714 mRNA_5346 0.19 0.1
505,577 + 13714 mRNA_5346 0.19 1.1
505,579 + 13714 mRNA_5346 0.19 0.8
505,579 + 13714 mRNA_5346 0.19 -0.7
505,598 + 13714 mRNA_5346 0.19 -0.8
505,613 - 13714 mRNA_5346 0.19 -0.3
505,630 + 13714 mRNA_5346 0.20 0.7
505,634 + 13714 mRNA_5346 0.20 -2.2
505,635 - 13714 mRNA_5346 0.20 -1.3
505,641 + 13714 mRNA_5346 0.20 0.3
505,651 + 13714 mRNA_5346 0.20 1.9
505,799 + 13714 mRNA_5346 0.24 -1.5
505,881 - 13714 mRNA_5346 0.26 -0.7
505,923 + 13714 mRNA_5346 0.27 -0.9
506,061 + 13714 mRNA_5346 0.30 -1.1
508,710 - -1.9
508,937 + -0.1
509,071 - 1.5
509,236 - 0.2
509,251 - 1.5
509,387 - 1.6
509,395 - -0.0
509,526 + 1.7
509,529 + -1.5
509,680 + -1.5
509,704 + -0.4
509,820 - -3.3
509,826 + -0.4
509,989 - -0.0