Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5328

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5327: 13695 - Hypothetical Protein, at 463511 to 464845 13695 mRNA_5328: 13696 - HMMPfam-ATP adenylyltransferase-PF09830,SUPERFAMILY--SSF54197, at 465608 to 466886 13696 mRNA_5329: 13697 - K02212 MCM4, CDC54 DNA replication licensing factor MCM4, at 467035 to 469864 13697

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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464,642 - 13695 mRNA_5327 0.85 -0.3
464,673 - 13695 mRNA_5327 0.87 0.3
464,954 - 1.0
464,956 + -0.3
464,969 + 0.8
464,977 - -2.0
465,122 + 0.0
465,125 + 3.1
465,129 - -2.9
465,132 + -2.7
465,252 + -0.7
465,267 + -1.1
465,281 - -1.4
465,292 - 0.7
465,300 - 0.9
465,408 - -1.1
465,417 + -1.3
465,418 + 1.7
465,451 - 1.2
465,584 + -0.6
465,590 + -1.5
465,607 + -0.3
465,619 + -1.1
466,016 - 13696 mRNA_5328 0.32 -0.2
466,467 - 13696 mRNA_5328 0.67 1.2
466,598 - 13696 mRNA_5328 0.77 -0.1
466,643 + 13696 mRNA_5328 0.81 -2.1
467,033 - -0.7
467,042 - 0.0
467,138 - -0.3
467,207 - -0.7
467,208 + -0.4
467,251 + 0.1
467,284 - 0.0
467,285 + 0.1
467,318 - 13697 mRNA_5329 0.10 0.2