Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5315

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5314: 13682 - Hypothetical Protein, at 433901 to 435484 13682 mRNA_5315: 13683 - K06158 ABCF3 ATP-binding cassette, subfamily F, member 3, at 436318 to 439528 13683 mRNA_5316: 13684 - Hypothetical Protein, at 440018 to 441628 13684

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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435,449 - -0.0
435,453 + 1.8
435,456 - -0.8
435,469 + 0.5
435,755 - -2.8
435,848 - -1.0
435,903 - 0.2
436,185 - 0.5
436,683 + 13683 mRNA_5315 0.11 -0.1
436,704 - 13683 mRNA_5315 0.12 0.2
436,869 + 13683 mRNA_5315 0.17 -2.6
437,102 + 13683 mRNA_5315 0.24 0.5
437,292 + 13683 mRNA_5315 0.30 -1.5
437,312 + 13683 mRNA_5315 0.31 -0.9
437,426 - 13683 mRNA_5315 0.35 0.0
437,426 - 13683 mRNA_5315 0.35 1.5
438,615 + 13683 mRNA_5315 0.72 1.2
438,895 - 13683 mRNA_5315 0.80 -0.4
438,914 + 13683 mRNA_5315 0.81 -1.4
439,151 - 13683 mRNA_5315 0.88 -0.4
439,159 - 13683 mRNA_5315 0.88 -0.5
439,316 - -2.0
439,323 + 1.8
439,349 + -1.6
439,474 - -0.6
439,580 + -1.9
439,582 - 0.0
439,639 - 0.5
439,652 - -1.4
439,771 - 0.8
439,789 + 1.0
439,789 + 0.1
439,921 - 1.7
439,926 - -1.8
439,929 + -0.4
439,935 + 0.9
439,970 + -0.5
440,178 + -1.3
440,210 + 13684 mRNA_5316 0.12 0.0
440,229 + 13684 mRNA_5316 0.13 -2.7
440,246 + 13684 mRNA_5316 0.14 -2.3
440,260 - 13684 mRNA_5316 0.15 -2.1
440,525 - 13684 mRNA_5316 0.31 0.1