Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5302

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5301: 13669 - K13950 pabAB para-aminobenzoate synthetase, at 394643 to 397418 13669 mRNA_5302: 13670 - K08711 ABCG2.PDR, CDR1 ATP-binding cassette, subfamily G (WHITE), member 2, PDR, at 397977 to 403896 13670

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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397,060 - 13669 mRNA_5301 0.87 0.0
397,161 + -1.0
397,207 - 0.2
397,376 - 0.4
397,498 + 1.2
397,526 + -1.6
397,809 - 0.4
397,818 + 0.5
398,115 + 0.6
398,287 + 0.5
398,287 + 1.6
398,389 - -0.6
398,390 + -2.2
398,466 + -0.2
398,620 - 13670 mRNA_5302 0.11 0.6
398,972 - 13670 mRNA_5302 0.17 1.6
399,129 + 13670 mRNA_5302 0.19 -0.3
399,245 + 13670 mRNA_5302 0.21 1.6
399,285 + 13670 mRNA_5302 0.22 -1.2
399,358 - 13670 mRNA_5302 0.23 2.4
399,535 + 13670 mRNA_5302 0.26 0.9
399,717 + 13670 mRNA_5302 0.29 0.9
399,726 - 13670 mRNA_5302 0.30 -0.3
399,813 + 13670 mRNA_5302 0.31 -1.1
399,814 + 13670 mRNA_5302 0.31 1.2
399,976 + 13670 mRNA_5302 0.34 1.4
400,145 + 13670 mRNA_5302 0.37 -0.2
400,286 - 13670 mRNA_5302 0.39 1.8
400,580 + 13670 mRNA_5302 0.44 1.9
400,613 - 13670 mRNA_5302 0.45 -0.7
400,618 - 13670 mRNA_5302 0.45 -1.4
400,682 - 13670 mRNA_5302 0.46 0.1
401,055 - 13670 mRNA_5302 0.52 -0.0
401,134 + 13670 mRNA_5302 0.53 0.5
401,272 + 13670 mRNA_5302 0.56 0.0
401,279 + 13670 mRNA_5302 0.56 2.1
401,331 - 13670 mRNA_5302 0.57 -0.4
401,367 + 13670 mRNA_5302 0.57 2.5
401,750 - 13670 mRNA_5302 0.64 -1.7
401,846 + 13670 mRNA_5302 0.65 -0.6
402,159 + 13670 mRNA_5302 0.71 1.9
403,219 - 13670 mRNA_5302 0.89 1.7
403,637 - -0.0
403,817 + -0.5
403,936 - -1.4
403,947 + -0.8
404,063 - 0.4
404,075 - -2.0
404,085 + -0.2
404,090 + 2.3
404,091 + -1.9
404,100 - 0.2
404,112 + 0.5
404,159 + -0.9
404,160 + 0.4
404,169 - -1.6
404,171 + 0.5
404,183 - -1.8
404,183 + 1.1
404,267 + -2.2
404,280 - 0.3
404,286 + 2.1
404,397 - -0.7
404,401 - -2.9
404,403 - -0.2
404,420 - -0.3
404,420 + 0.4
404,505 - -1.5
404,505 - 0.1
404,525 - 0.0
404,538 + 0.5
404,539 - -0.2
404,654 - -0.9
404,654 - 0.9
404,655 - 1.1
404,666 + 0.4
404,675 + -0.9
404,814 - -0.0
404,842 - 0.2
404,868 - 0.1