Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5288

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5287: 13655 - KOG0835 Cyclin L, at 361446 to 362639 13655 mRNA_5288: 13656 - HMMPfam-Complex I intermediate-associated protein 30 (CIA30)-PF08547,SUPERFAMILY--SSF49785, at 362943 to 363833 13656 mRNA_5289: 13657 - K00344 qor, CRYZ NADPH2-quinone reductase, at 363937 to 365504 13657

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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362,071 - 13655 mRNA_5287 0.52 2.1
362,678 + 0.5
362,931 - 1.6
362,962 + 1.2
363,068 - 13656 mRNA_5288 0.14 0.7
363,113 + 13656 mRNA_5288 0.19 1.3
363,197 - 13656 mRNA_5288 0.29 -0.0
363,574 + 13656 mRNA_5288 0.71 0.0
363,655 + 13656 mRNA_5288 0.80 -1.0
363,716 - 13656 mRNA_5288 0.87 -0.2
363,766 + 1.5
364,061 - -0.7
364,259 + 13657 mRNA_5289 0.21 0.5
364,403 + 13657 mRNA_5289 0.30 -0.1
364,518 + 13657 mRNA_5289 0.37 0.8
364,645 - 13657 mRNA_5289 0.45 -2.9