Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5276

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5275: 13643 - K06688 UBE2C, UBC11 ubiquitin-conjugating enzyme E2 C, at 337519 to 338338 13643 mRNA_5276: 13644 - Hypothetical Protein, at 339259 to 340241 13644 mRNA_5277: 13645 - Hypothetical Protein, at 340398 to 341217 13645

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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338,260 + 0.9
338,265 - -0.4
338,294 - -0.8
338,391 + 1.4
338,417 + 0.1
338,552 - 0.0
338,649 + 1.9
338,693 + 1.8
338,709 + -0.2
338,733 - 0.2
338,792 + -0.3
338,795 + 0.6
338,849 + -0.5
338,853 - 1.0
338,946 - -0.6
338,987 - -2.1
338,994 + -0.2
338,998 - -0.6
339,006 + -2.4
339,276 - 0.4
339,293 - 0.2
339,855 - 13644 mRNA_5276 0.61 0.5
339,856 - 13644 mRNA_5276 0.61 -0.9
339,856 - 13644 mRNA_5276 0.61 -0.6
339,861 + 13644 mRNA_5276 0.61 0.6
339,861 + 13644 mRNA_5276 0.61 1.9
339,862 + 13644 mRNA_5276 0.61 0.9
339,864 - 13644 mRNA_5276 0.62 -0.1
339,927 + 13644 mRNA_5276 0.68 2.0
340,119 + 13644 mRNA_5276 0.87 -0.3
340,313 - 0.1
340,454 + 0.3
340,479 - 0.5
340,480 - 13645 mRNA_5277 0.10 -1.4
340,564 - 13645 mRNA_5277 0.20 -1.8
340,675 - 13645 mRNA_5277 0.34 -0.7
340,723 - 13645 mRNA_5277 0.40 -1.2
341,050 - 13645 mRNA_5277 0.80 0.2
341,117 + 13645 mRNA_5277 0.88 -0.9