Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5264

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5263: 13631 - BLAST pyruvate dehydrogenase E1 component subunit alpha [Mi..., at 309267 to 309581 13631 mRNA_5264: 13632 - Hypothetical Protein, at 310145 to 311167 13632 mRNA_5265: 13633 - K18749 LSM14, RAP55, SCD6 protein LSM14, at 311622 to 313606 13633

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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309,159 - -0.3
309,174 - 0.1
309,201 + 0.7
309,298 - 0.1
309,311 - 13631 mRNA_5263 0.14 -0.2
309,440 - 13631 mRNA_5263 0.55 0.2
309,452 + 13631 mRNA_5263 0.59 0.2
309,462 - 13631 mRNA_5263 0.62 0.3
309,768 + 0.0
309,782 + 1.1
309,784 - -1.1
309,855 + 0.2
309,855 - -0.4
309,875 + 1.4
309,881 - 0.7
309,885 - -3.8
309,909 + 0.1
309,920 - -1.2
309,923 - 1.1
309,935 - -0.1
309,948 + -0.5
310,064 - 2.6
310,065 - 1.0
310,072 - -1.9
310,078 + 0.7
310,090 - 0.1
310,218 - -0.9
310,360 - 13632 mRNA_5264 0.21 1.4
310,392 + 13632 mRNA_5264 0.24 -0.2
310,393 - 13632 mRNA_5264 0.24 -0.4
310,652 - 13632 mRNA_5264 0.50 0.1
310,979 + 13632 mRNA_5264 0.82 -0.0
311,506 - 0.2
311,523 + -0.3
311,542 - -0.1
311,544 + -0.0
311,680 + 1.7
311,684 - -0.2
311,695 + -0.1
311,819 - 0.2
311,820 - -1.7
311,846 + 13633 mRNA_5265 0.11 0.4
311,855 + 13633 mRNA_5265 0.12 0.0
312,021 + 13633 mRNA_5265 0.20 1.1