Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5215

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5214: 13582 - K03845 ALG3 alpha-1,3-mannosyltransferase, at 164395 to 166467 13582 mRNA_5215: 13583 - KOG1940 Zn-finger protein, at 166614 to 167435 13583 mRNA_5217: 13585 - Hypothetical Protein, at 167751 to 168514 13585

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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165,701 - 13582 mRNA_5214 0.63 0.2
165,858 + 13582 mRNA_5214 0.71 1.9
165,948 + 13582 mRNA_5214 0.75 0.6
166,072 + 13582 mRNA_5214 0.81 -0.3
166,118 - 13582 mRNA_5214 0.83 -0.5
166,235 + 13582 mRNA_5214 0.89 -0.4
166,253 - 13582 mRNA_5214 0.90 -0.4
166,276 - 1.4
166,355 + -0.1
166,394 + 0.0
166,407 + -1.5
166,408 + 1.4
166,755 + 13583 mRNA_5215 0.17 0.6
167,243 + 13583 mRNA_5215 0.77 -0.9
167,536 - 2.8
167,984 + 13585 mRNA_5217 0.30 -0.4
168,036 + 13585 mRNA_5217 0.37 -1.3
168,141 - 13585 mRNA_5217 0.51 1.0
168,170 - 13585 mRNA_5217 0.55 1.0
168,417 - 13585 mRNA_5217 0.87 -2.3
168,429 - 13585 mRNA_5217 0.89 -0.8