Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5186

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5186: 13554 - KOG0023 Alcohol dehydrogenase, class V, at 101538 to 103195 13554 mRNA_5187: 13555 - KOG2533 Permease of the major facilitator superfamily, at 103886 to 106875 13555

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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100,635 + -0.5
100,646 - 1.0
100,687 + 0.2
100,731 - 1.2
100,845 - 0.5
100,851 - -1.3
100,855 - 1.1
101,137 - -0.3
101,887 - 13554 mRNA_5186 0.21 0.0
102,042 - 13554 mRNA_5186 0.30 -1.4
102,207 - 13554 mRNA_5186 0.40 -0.4
102,470 - 13554 mRNA_5186 0.56 0.2
102,564 - 13554 mRNA_5186 0.62 -0.3
103,250 - 0.4
103,414 + -0.3
103,587 - 0.3
103,612 + 1.5
103,729 + 0.6
103,740 + 0.0
103,896 - 0.6