Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5170

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5169: 13537 - Hypothetical Protein, at 62559 to 64260 13537 mRNA_5170: 13538 - Hypothetical Protein, at 64710 to 65306 13538 mRNA_5171: 13539 - KOG2262 Sexual differentiation process protein ISP4, at 65762 to 68577 13539

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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63,720 + 13537 mRNA_5169 0.68 0.1
63,868 + 13537 mRNA_5169 0.77 0.0
63,869 + 13537 mRNA_5169 0.77 0.3
64,004 - 13537 mRNA_5169 0.85 -1.5
64,030 + 13537 mRNA_5169 0.86 0.3
64,030 + 13537 mRNA_5169 0.86 0.6
64,154 - -1.2
64,173 + 1.0
64,180 + 0.2
64,221 + 3.6
64,302 + 0.5
64,315 - 0.6
64,334 - -0.7
64,341 + 0.2
64,343 - 0.7
64,343 + 0.3
64,348 + 1.5
64,358 + 0.2
64,522 + -0.8
65,233 + 13538 mRNA_5170 0.88 -0.1
65,514 + 0.4
65,527 - 0.4
65,611 + -0.3
65,614 + 0.7
65,672 - 0.3
65,673 + 0.6
65,676 + 0.0
65,684 - 1.0
65,691 - 0.2
65,852 + 0.8
65,950 - -0.5
66,256 - 13539 mRNA_5171 0.18 0.1
66,263 - 13539 mRNA_5171 0.18 -0.3