Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5142

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5141: 13509 - K12198 CHMP5, VPS60 charged multivesicular body protein 5, at 1 to 752 13509 mRNA_5142: 13510 - K13577 SLC25A10, DIC solute carrier family 25 (mitochondrial dicarboxylate transporter), member 10, at 1705 to 3095 13510

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,004 + 2.1
1,164 + -0.9
1,286 - -0.2
1,299 + -0.5
1,302 - -0.8
1,556 - 0.1
1,774 - -1.7
1,781 + 0.0
1,884 + 13510 mRNA_5142 0.13 -0.0
2,003 - 13510 mRNA_5142 0.21 -0.2
2,160 - 13510 mRNA_5142 0.33 1.1
2,367 + 13510 mRNA_5142 0.48 0.7
2,439 - 13510 mRNA_5142 0.53 -0.5
2,786 + 13510 mRNA_5142 0.78 0.0
2,895 + 13510 mRNA_5142 0.86 -0.3
3,162 - -0.2
3,478 + -0.9
3,502 + -0.3
3,509 + -1.2
3,622 + 2.3
3,622 + 1.9
3,628 + 0.4
3,641 + 1.7
3,726 - -1.2
3,741 + 0.4
3,765 + -0.2
3,803 + -0.1
4,034 + -0.9