Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5081

Experiments: 40 hrs No Buoyancy Separation

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5080: 13448 - K12486 SMAP stromal membrane-associated protein, at 1699891 to 1701497 13448 mRNA_5081: 13449 - K10396 KIF5 kinesin family member 5, at 1701702 to 1705465 13449 mRNA_5082: 13450 - K10696 BRE1 E3 ubiquitin-protein ligase BRE1, at 1706172 to 1709244 13450

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
remove
1,700,944 - 13448 mRNA_5080 0.66 0.5
1,701,461 - -0.9
1,701,716 - -0.9
1,701,765 - 0.1
1,702,619 + 13449 mRNA_5081 0.24 -0.0
1,703,038 - 13449 mRNA_5081 0.35 -0.2
1,703,168 - 13449 mRNA_5081 0.39 -1.1
1,703,345 - 13449 mRNA_5081 0.44 -1.2
1,703,346 - 13449 mRNA_5081 0.44 0.6
1,703,363 + 13449 mRNA_5081 0.44 -2.1
1,704,056 + 13449 mRNA_5081 0.63 1.8
1,704,206 + 13449 mRNA_5081 0.67 -1.8
1,705,373 + -2.1
1,705,512 - -0.7
1,705,646 - -0.1
1,705,653 + -0.3
1,705,656 - -1.0
1,705,795 + -2.3
1,705,807 + -1.0
1,705,811 - -1.5
1,705,812 - 0.2
1,706,081 - -1.1
1,706,085 + -0.5
1,706,235 - 1.5
1,706,383 + 1.9