Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5050

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5049: 13417 - HMMPfam-Cytochrome P450-PF00067,SUPERFAMILY--SSF48264, at 1633611 to 1634725 13417 mRNA_5050: 13418 - Hypothetical Protein, at 1634972 to 1635708 13418 mRNA_5051: 13419 - KOG1382 Multiple inositol polyphosphate phosphatase, at 1635968 to 1637866 13419

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,634,580 - 13417 mRNA_5049 0.87 -1.6
1,634,712 - 0.8
1,634,750 + -0.3
1,634,753 + 1.2
1,634,913 + 0.1
1,634,917 - 1.0
1,634,962 - 0.1
1,635,029 - -0.7
1,635,056 - 13418 mRNA_5050 0.11 -0.2
1,635,181 - 13418 mRNA_5050 0.28 0.1
1,635,191 + 13418 mRNA_5050 0.30 -0.5
1,635,228 + 13418 mRNA_5050 0.35 -0.2
1,635,299 + 13418 mRNA_5050 0.44 -1.2
1,635,308 + 13418 mRNA_5050 0.46 0.6
1,635,332 - 13418 mRNA_5050 0.49 0.6
1,635,352 - 13418 mRNA_5050 0.52 -0.3
1,635,444 + 13418 mRNA_5050 0.64 -0.1
1,635,453 + 13418 mRNA_5050 0.65 -0.6
1,635,559 + 13418 mRNA_5050 0.80 -0.5
1,635,593 + 13418 mRNA_5050 0.84 -0.8
1,635,606 + 13418 mRNA_5050 0.86 -0.1
1,635,667 - 1.2
1,635,763 - 0.5
1,635,800 - -1.2
1,635,818 + 1.8
1,635,895 - 1.8
1,635,915 + 4.1
1,636,194 - 13419 mRNA_5051 0.12 0.9
1,636,227 + 13419 mRNA_5051 0.14 -0.9
1,636,349 + 13419 mRNA_5051 0.20 -2.6
1,636,354 + 13419 mRNA_5051 0.20 0.4
1,636,355 - 13419 mRNA_5051 0.20 -0.9
1,636,510 + 13419 mRNA_5051 0.29 -0.0