Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5037

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5036: 13404 - Hypothetical Protein, at 1610086 to 1610551 13404 mRNA_5037: 13405 - HMMPfam-Phosphotransferase enzyme family-PF01636,SUPERFAMILY--SSF56112, at 1610939 to 1612058 13405 mRNA_5038: 13406 - Hypothetical Protein, at 1613042 to 1613500 13406

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,610,184 - 13404 mRNA_5036 0.21 0.3
1,610,205 + 13404 mRNA_5036 0.26 -0.8
1,610,209 + 13404 mRNA_5036 0.26 -0.5
1,610,230 + 13404 mRNA_5036 0.31 0.7
1,610,298 - 13404 mRNA_5036 0.45 -1.0
1,610,351 + 13404 mRNA_5036 0.57 -0.2
1,610,355 + 13404 mRNA_5036 0.58 -2.8
1,610,465 - 13404 mRNA_5036 0.81 1.0
1,610,608 - 0.2
1,610,611 + -0.6
1,610,616 - -1.8
1,610,625 - -2.0
1,610,633 - 1.1
1,610,670 - -2.3
1,610,747 - 0.6
1,610,769 - -0.2
1,610,817 + -0.8
1,610,826 + 0.9
1,610,957 + -0.4
1,610,982 - -2.4
1,611,062 + 13405 mRNA_5037 0.11 0.1
1,611,363 - 13405 mRNA_5037 0.38 2.5
1,611,364 + 13405 mRNA_5037 0.38 -1.1
1,611,575 + 13405 mRNA_5037 0.57 1.2
1,611,754 - 13405 mRNA_5037 0.73 0.3
1,611,789 - 13405 mRNA_5037 0.76 -0.7
1,611,811 + 13405 mRNA_5037 0.78 -0.5
1,611,933 + 13405 mRNA_5037 0.89 0.2
1,611,953 - 1.3
1,611,961 - 0.8
1,612,099 + 0.3
1,612,102 + -0.0
1,612,106 + -0.5
1,612,142 - 2.4
1,612,225 - -0.1
1,612,228 + 1.4
1,612,234 + 0.6
1,612,235 + -2.7
1,612,237 + 0.9
1,612,247 - 1.8
1,612,248 - 0.1
1,612,251 + 0.2
1,612,255 + -0.3
1,612,331 + -1.8
1,612,348 + -0.9
1,612,348 + 2.0
1,612,349 - -0.3
1,612,350 + 0.6
1,612,360 + 0.6
1,612,397 - 1.0
1,612,493 + 2.5
1,612,507 + 0.1
1,612,639 - 0.8
1,612,646 - -0.2
1,612,657 - -0.1
1,612,795 - -0.1
1,612,798 + 2.4
1,612,817 - -0.6
1,612,820 - 0.6
1,612,968 - 0.2
1,612,985 + 0.2