Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4990

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4989: 13357 - Hypothetical Protein, at 1485685 to 1486453 13357 mRNA_4990: 13358 - K00354 E1.6.99.1 NADPH2 dehydrogenase, at 1486606 to 1488181 13358 mRNA_4991: 13359 - Hypothetical Protein, at 1488535 to 1491302 13359

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,485,635 + -0.2
1,485,799 - 13357 mRNA_4989 0.15 -0.1
1,485,812 - 13357 mRNA_4989 0.17 -0.2
1,485,815 - 13357 mRNA_4989 0.17 0.5
1,485,828 - 13357 mRNA_4989 0.19 -0.8
1,485,953 + 13357 mRNA_4989 0.35 -1.4
1,485,974 - 13357 mRNA_4989 0.38 0.4
1,485,979 - 13357 mRNA_4989 0.38 0.9
1,486,114 + 13357 mRNA_4989 0.56 -0.5
1,486,983 + 13358 mRNA_4990 0.24 -0.1
1,487,081 + 13358 mRNA_4990 0.30 1.5
1,487,105 + 13358 mRNA_4990 0.32 -0.1
1,487,137 + 13358 mRNA_4990 0.34 -2.7
1,487,267 + 13358 mRNA_4990 0.42 1.0
1,487,270 - 13358 mRNA_4990 0.42 1.1
1,487,286 + 13358 mRNA_4990 0.43 1.7
1,488,017 - 13358 mRNA_4990 0.90 -1.2
1,488,133 - 0.3
1,488,136 - 0.0
1,488,136 + -0.2
1,488,138 - -0.6
1,488,178 + 0.9
1,488,296 + -0.1
1,488,305 + -0.3
1,488,323 + 0.3
1,488,327 + -0.2
1,488,333 - 0.4
1,488,372 - 0.3
1,488,428 - -1.5
1,488,433 + -1.6