Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4876

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4875: 13243 - ProSitePatterns-Tyrosine protein kinases specific active-site signature.-PS00109,SUPERFAMILY--SSF56112, at 1195483 to 1197426 13243 mRNA_4876: 13244 - K20133 USP6NL USP6 N-terminal-like protein, at 1198224 to 1200676 13244 mRNA_4877: 13245 - KOG2533 Permease of the major facilitator superfamily, at 1201220 to 1203456 13245

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,197,503 - -0.2
1,197,639 + -0.0
1,197,642 - -0.6
1,197,655 + 0.8
1,197,782 - 1.6
1,197,792 - 2.3
1,197,802 - 0.8
1,197,937 - 2.3
1,197,951 + -0.2
1,197,955 - -0.8
1,197,974 + 2.5
1,198,865 - 13244 mRNA_4876 0.26 0.7
1,199,396 - 13244 mRNA_4876 0.48 -0.3
1,199,407 + 13244 mRNA_4876 0.48 0.5
1,199,852 - 13244 mRNA_4876 0.66 -0.3
1,199,859 + 13244 mRNA_4876 0.67 -0.3
1,199,980 + 13244 mRNA_4876 0.72 -1.0
1,200,285 + 13244 mRNA_4876 0.84 -1.6
1,200,420 - 13244 mRNA_4876 0.90 -0.7
1,200,546 + 0.3
1,200,554 + -0.7
1,200,566 + 0.6
1,200,716 - 1.3
1,200,873 - 0.3
1,201,006 + 1.1
1,201,010 + -0.2
1,201,204 + -0.5