Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4794

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4793: 13161 - HMMPfam-Peroxidase-PF00141,PRINTS-Haem peroxidase superfamily signature-PR00458,PRINTS-Plant ascorbate peroxidase signature-PR00459,ProSitePatterns-Peroxidases proximal heme-ligand signature.-PS00435,ProSitePatterns-Peroxidases active site signature.-PS00436,ProSiteProfiles-Plant heme peroxidase family profile.-PS50873,SUPERFAMILY--SSF48113, at 1025868 to 1027318 13161 mRNA_4794: 13162 - Hypothetical Protein, at 1027671 to 1028225 13162 mRNA_4795: 13163 - Hypothetical Protein, at 1028579 to 1029667 13163

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,026,783 + 13161 mRNA_4793 0.63 0.6
1,026,794 + 13161 mRNA_4793 0.64 0.7
1,026,934 - 13161 mRNA_4793 0.73 -2.3
1,026,937 + 13161 mRNA_4793 0.74 0.8
1,027,018 + 13161 mRNA_4793 0.79 -1.2
1,027,573 - -0.1
1,027,796 + 13162 mRNA_4794 0.23 2.0
1,028,068 + 13162 mRNA_4794 0.72 0.3
1,028,114 + 13162 mRNA_4794 0.80 1.8
1,028,518 - -0.6
1,028,524 + 0.3
1,028,527 - -1.4
1,028,698 - 13163 mRNA_4795 0.11 1.7
1,028,965 - 13163 mRNA_4795 0.35 -0.2
1,029,098 + 13163 mRNA_4795 0.48 0.2
1,029,162 + 13163 mRNA_4795 0.54 -0.7