Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4746

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4745: 13113 - K17086 TM9SF2_4 transmembrane 9 superfamily member 2/4, at 908739 to 911438 13113 mRNA_4746: 13114 - Hypothetical Protein, at 911729 to 913359 13114 mRNA_4747: 13115 - SUPERFAMILY--SSF52047, at 913676 to 915300 13115

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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910,935 + 13113 mRNA_4745 0.81 -0.2
911,021 - 13113 mRNA_4745 0.85 -0.9
911,092 + 13113 mRNA_4745 0.87 -0.6
911,287 + 0.6
911,300 + 1.2
911,352 - 0.7
911,442 + 0.8
911,475 - 0.5
911,482 + -1.0
911,578 + 0.2
911,580 - 0.6
911,591 - 1.9
911,595 + 1.6
911,598 - 0.3
911,599 + 2.4
911,613 - 1.3
911,630 + -1.2
911,754 - -0.2
911,759 - -1.7
911,760 + 1.1
911,782 - 3.3
911,782 + 0.3
911,811 + -2.2
911,871 + 1.1
912,027 + 13114 mRNA_4746 0.18 -1.4
912,071 - 13114 mRNA_4746 0.21 -1.7
912,085 - 13114 mRNA_4746 0.22 -0.9
912,220 - 13114 mRNA_4746 0.30 0.3
912,332 - 13114 mRNA_4746 0.37 1.2
912,488 - 13114 mRNA_4746 0.47 1.0
912,523 - 13114 mRNA_4746 0.49 -1.2
912,622 + 13114 mRNA_4746 0.55 0.9
912,671 + 13114 mRNA_4746 0.58 0.6
912,802 - 13114 mRNA_4746 0.66 -1.3
912,918 - 13114 mRNA_4746 0.73 1.2
912,933 + 13114 mRNA_4746 0.74 -0.6
912,945 - 13114 mRNA_4746 0.75 1.1
913,311 - -0.2
913,404 + 1.3
913,427 + 0.3
913,549 + 0.1
913,553 - -2.3
913,557 + -0.4
913,567 - -0.5
913,679 - 0.2
913,682 - -2.4
913,700 + 2.0
913,708 + 2.2
913,718 + -0.5
913,722 + -1.5
913,753 - 0.5
913,755 - -0.3
913,762 + 1.5
913,807 + 0.8
913,813 + 1.9
913,816 - 1.0
913,867 - 13115 mRNA_4747 0.12 -0.7
913,900 + 13115 mRNA_4747 0.14 -0.5
913,965 - 13115 mRNA_4747 0.18 -0.6
914,001 - 13115 mRNA_4747 0.20 0.7
914,252 - 13115 mRNA_4747 0.35 1.1