Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4744

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4744: 13112 - HMMPfam-Uncharacterized alpha/beta hydrolase domain (DUF2235)-PF09994, at 906003 to 908213 13112 mRNA_4745: 13113 - K17086 TM9SF2_4 transmembrane 9 superfamily member 2/4, at 908739 to 911438 13113

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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905,131 + -1.7
905,212 - 0.4
905,451 + 1.7
905,468 - -1.7
905,469 - -1.3
905,627 - -1.3
905,631 + -1.7
905,631 - -0.7
905,748 + -0.1
905,794 + -0.0
905,801 + -0.2
905,851 - 0.3
905,856 - 0.8
905,865 + 1.0
905,869 - 0.5
905,870 - -0.8
905,883 - 0.3
905,896 - 1.4
905,903 - 1.0
905,917 + -0.1
905,922 - -0.1
905,930 + -2.4
905,949 - 1.0
905,951 + -0.7
905,964 - 1.0
905,964 + 1.6
905,965 + -0.2
905,966 - 2.1
905,970 - 0.3
905,978 - 1.7
906,149 - -0.9
906,228 - 13112 mRNA_4744 0.10 0.1
906,234 + 13112 mRNA_4744 0.10 1.8
906,366 - 13112 mRNA_4744 0.16 0.1
906,541 + 13112 mRNA_4744 0.24 -0.2
906,577 + 13112 mRNA_4744 0.26 -0.3
906,654 - 13112 mRNA_4744 0.29 -0.3
906,972 + 13112 mRNA_4744 0.44 -3.7
907,275 + 13112 mRNA_4744 0.58 -1.2
907,296 - 13112 mRNA_4744 0.58 1.5
907,439 - 13112 mRNA_4744 0.65 1.7
907,514 + 13112 mRNA_4744 0.68 2.4
907,735 + 13112 mRNA_4744 0.78 1.1
907,773 - 13112 mRNA_4744 0.80 -1.0
907,807 - 13112 mRNA_4744 0.82 -0.9
907,816 + 13112 mRNA_4744 0.82 -0.0
907,949 + 13112 mRNA_4744 0.88 -0.6
908,191 - -0.5
908,288 + -1.1
908,444 + 0.2
908,605 + 0.4
908,674 + -0.3
908,682 - 1.3
908,827 + 1.6
908,963 + -0.9
909,068 + 13113 mRNA_4745 0.12 -1.2
909,151 - 13113 mRNA_4745 0.15 -1.4