Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4741

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4740: 13108 - Hypothetical Protein, at 896087 to 896524 13108 mRNA_4741: 13109 - KOG2208 Vigilin, at 896784 to 901112 13109 mRNA_4742: 13110 - SUPERFAMILY--SSF52047, at 901391 to 902457 13110

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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895,907 + -0.0
896,044 + 0.1
896,046 - 1.9
896,046 - -0.7
896,055 - -1.0
896,176 - 13108 mRNA_4740 0.20 -0.1
896,209 + 13108 mRNA_4740 0.28 0.3
896,302 + 13108 mRNA_4740 0.49 0.1
896,308 + 13108 mRNA_4740 0.50 -1.1
896,314 + 13108 mRNA_4740 0.52 0.2
896,424 - 13108 mRNA_4740 0.77 0.1
896,447 + 13108 mRNA_4740 0.82 -0.7
896,455 + 13108 mRNA_4740 0.84 -0.9
896,456 - 13108 mRNA_4740 0.84 -1.8
896,475 + 13108 mRNA_4740 0.89 -1.3
896,510 + 0.4
896,579 - -0.2
896,662 - 0.3
896,752 + -0.0
896,770 - 2.8
896,773 + 0.9
896,788 - 1.6
896,907 - -1.8
896,912 + -0.3
897,050 - 0.2
897,052 + 0.0
897,060 - -0.6
897,066 + 0.4
897,072 + 0.2
897,086 + 1.3
897,181 + -0.3
897,207 - -0.1
897,235 + 13109 mRNA_4741 0.10 -0.8
897,339 + 13109 mRNA_4741 0.13 0.5
897,344 - 13109 mRNA_4741 0.13 0.8
897,393 - 13109 mRNA_4741 0.14 -0.0
897,400 + 13109 mRNA_4741 0.14 -0.2
897,493 - 13109 mRNA_4741 0.16 0.0
897,798 + 13109 mRNA_4741 0.23 -0.6
897,886 + 13109 mRNA_4741 0.25 -0.0
897,912 + 13109 mRNA_4741 0.26 0.3
898,193 - 13109 mRNA_4741 0.33 -0.1
898,201 + 13109 mRNA_4741 0.33 0.8
898,210 + 13109 mRNA_4741 0.33 1.8
898,229 - 13109 mRNA_4741 0.33 1.8
898,395 - 13109 mRNA_4741 0.37 0.1
898,643 + 13109 mRNA_4741 0.43 0.4
898,647 - 13109 mRNA_4741 0.43 0.8
898,656 + 13109 mRNA_4741 0.43 -0.7
898,788 + 13109 mRNA_4741 0.46 -0.1
898,791 - 13109 mRNA_4741 0.46 -1.3
898,795 - 13109 mRNA_4741 0.46 1.1
899,096 + 13109 mRNA_4741 0.53 1.8
899,353 - 13109 mRNA_4741 0.59 0.3
899,465 + 13109 mRNA_4741 0.62 -0.5
899,647 - 13109 mRNA_4741 0.66 -0.3
899,736 - 13109 mRNA_4741 0.68 1.2
899,784 + 13109 mRNA_4741 0.69 0.3
899,827 - 13109 mRNA_4741 0.70 1.6
899,859 + 13109 mRNA_4741 0.71 0.8
899,989 - 13109 mRNA_4741 0.74 0.1
900,048 - 13109 mRNA_4741 0.75 0.4
900,428 + 13109 mRNA_4741 0.84 -1.0
900,595 - 13109 mRNA_4741 0.88 0.9
900,670 + 13109 mRNA_4741 0.90 0.1
900,834 - 0.1
900,885 - 0.3
900,892 + 0.6
900,967 - -0.6
901,042 + 2.0
901,180 + -0.2
901,282 - 1.0
901,357 + -0.1
901,862 - 13110 mRNA_4742 0.44 -1.8
901,928 + 13110 mRNA_4742 0.50 -0.5
901,930 - 13110 mRNA_4742 0.51 -0.8