Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4740

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4739: 13107 - K06883 K06883 uncharacterized protein, at 893968 to 895440 13107 mRNA_4740: 13108 - Hypothetical Protein, at 896087 to 896524 13108 mRNA_4741: 13109 - KOG2208 Vigilin, at 896784 to 901112 13109

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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895,611 - -0.1
895,611 - -2.9
895,618 + -1.0
895,907 + -0.0
896,044 + 0.1
896,046 - 1.9
896,046 - -0.7
896,055 - -1.0
896,176 - 13108 mRNA_4740 0.20 -0.1
896,209 + 13108 mRNA_4740 0.28 0.3
896,302 + 13108 mRNA_4740 0.49 0.1
896,308 + 13108 mRNA_4740 0.50 -1.1
896,314 + 13108 mRNA_4740 0.52 0.2
896,424 - 13108 mRNA_4740 0.77 0.1
896,447 + 13108 mRNA_4740 0.82 -0.7
896,455 + 13108 mRNA_4740 0.84 -0.9
896,456 - 13108 mRNA_4740 0.84 -1.8
896,475 + 13108 mRNA_4740 0.89 -1.3
896,510 + 0.4
896,579 - -0.2
896,662 - 0.3
896,752 + -0.0
896,770 - 2.8
896,773 + 0.9
896,788 - 1.6
896,907 - -1.8
896,912 + -0.3
897,050 - 0.2
897,052 + 0.0
897,060 - -0.6
897,066 + 0.4
897,072 + 0.2
897,086 + 1.3
897,181 + -0.3
897,207 - -0.1
897,235 + 13109 mRNA_4741 0.10 -0.8
897,339 + 13109 mRNA_4741 0.13 0.5
897,344 - 13109 mRNA_4741 0.13 0.8
897,393 - 13109 mRNA_4741 0.14 -0.0
897,400 + 13109 mRNA_4741 0.14 -0.2
897,493 - 13109 mRNA_4741 0.16 0.0