Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4710

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4709: 13077 - Hypothetical Protein, at 821817 to 823479 13077 mRNA_4710: 13078 - BLAST putative mannoprotein [Rhizoctonia solani 123E], at 824184 to 826218 13078 mRNA_4711: 13079 - KOG1001 Helicase-like transcription factor HLTF/DNA helicase RAD5, DEAD-box superfamily, at 826547 to 830720 13079

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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823,638 + 0.2
823,808 + -0.3
823,873 + 0.8
823,886 - 1.4
823,888 + 3.7
823,932 + 0.3
823,968 + 1.2
823,975 - -1.0
823,976 + -0.9
824,075 - 0.6
824,094 + -1.7
824,103 + -0.2
824,107 - -1.8
824,108 - -3.3
824,124 - -0.5
824,134 + -1.4
824,143 + -3.1
824,274 + -0.3
824,420 - 13078 mRNA_4710 0.12 2.6
824,548 - 13078 mRNA_4710 0.18 -0.6
824,828 + 13078 mRNA_4710 0.32 -0.2
824,857 - 13078 mRNA_4710 0.33 1.7
824,866 + 13078 mRNA_4710 0.34 1.4
825,858 - 13078 mRNA_4710 0.82 0.5
825,987 - 13078 mRNA_4710 0.89 0.9
826,022 - 1.6
826,244 - -0.0
826,246 - 1.0
826,247 - -0.2
826,256 - -1.2
826,268 - 0.8
826,277 - -0.4
826,289 - -1.8
826,289 - -0.3
826,290 + -2.0
826,295 + -1.0
826,306 - -0.5
826,314 + -1.7
826,470 - 2.3
826,491 + -0.6
826,584 - -0.2
826,686 + 0.5
826,728 + -1.0
826,885 + 2.2