Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4689

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4689: 13057 - Hypothetical Protein, at 781177 to 782706 13057 mRNA_4690: 13058 - HMMPfam-Heterokaryon incompatibility protein Het-C-PF07217, at 783339 to 787092 13058

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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780,195 + -0.3
780,220 - -0.6
780,807 + 2.3
780,926 - 0.1
781,095 - 0.1
781,114 - -1.6
781,117 - 0.3
781,122 + -0.9
781,123 + -0.2
781,127 + 0.3
781,129 - 1.2
781,129 + 0.5
781,141 - 0.1
781,150 + 1.1
781,250 - 1.0
781,257 - 2.0
781,261 + 0.8
781,265 + 0.2
781,266 - 0.9
781,281 + 0.4
781,412 - 13057 mRNA_4689 0.15 -1.0
781,415 - 13057 mRNA_4689 0.16 0.5
781,427 - 13057 mRNA_4689 0.16 -1.7
781,430 - 13057 mRNA_4689 0.17 -0.0
781,431 + 13057 mRNA_4689 0.17 0.9
781,432 - 13057 mRNA_4689 0.17 0.8
781,433 + 13057 mRNA_4689 0.17 0.1
781,559 + 13057 mRNA_4689 0.25 -2.4
781,580 - 13057 mRNA_4689 0.26 -0.5
781,714 + 13057 mRNA_4689 0.35 -2.2
781,729 - 13057 mRNA_4689 0.36 -0.3
781,736 + 13057 mRNA_4689 0.37 0.2
781,737 - 13057 mRNA_4689 0.37 -0.7
782,003 - 13057 mRNA_4689 0.54 -1.9
782,043 + 13057 mRNA_4689 0.57 0.3
782,050 + 13057 mRNA_4689 0.57 -0.5
782,289 - 13057 mRNA_4689 0.73 -2.3
782,881 - 1.7
783,059 - 1.5
783,357 - -1.1