Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4673

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4672: 13040 - K11979 UBR7 E3 ubiquitin-protein ligase UBR7, at 742031 to 743506 13040 mRNA_4673: 13041 - K01069 E3.1.2.6, gloB hydroxyacylglutathione hydrolase, at 743886 to 745346 13041 mRNA_4674: 13042 - K08150 SLC2A13, ITR MFS transporter, SP family, solute carrier family 2 (myo-inositol transporter), member 13, at 745872 to 747839 13042

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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742,954 - 13040 mRNA_4672 0.63 -1.8
743,071 + 13040 mRNA_4672 0.70 -1.2
743,532 + 0.6
743,809 + -1.7
743,814 - -0.4
743,824 - -0.2
743,993 + -0.1
743,998 + 0.6
744,019 - -0.1
744,278 + 13041 mRNA_4673 0.27 0.3
744,954 + 13041 mRNA_4673 0.73 0.8
744,966 + 13041 mRNA_4673 0.74 1.7
745,219 - 1.6
745,228 + 1.3
745,295 + -2.2
745,330 - -2.6
745,362 - -0.8
745,409 - 0.0
745,414 - 0.0
745,415 - -0.4
745,419 - -1.1
745,420 - -2.0
745,421 + -1.3
745,421 + -1.4
745,424 + -0.1
745,428 - -0.1
745,432 + -1.7
745,434 - 1.9
745,437 + -1.1
745,450 - -1.0
745,455 + 0.6
745,456 - 0.2
745,496 - 0.4
745,502 + -0.1
745,552 + -1.1
745,562 + 0.3
745,569 + -0.4
745,574 - 0.2
745,581 - -0.6
745,585 + 2.2
745,591 + 0.3
745,654 - 1.3
745,714 - -0.1
745,717 - -1.1
745,733 + -0.2
745,734 + -2.8
745,756 + 1.2
745,774 + -3.3
745,904 - -0.1
745,905 - 2.0
746,216 + 13042 mRNA_4674 0.17 0.0