Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4659

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4658: 13026 - Hypothetical Protein, at 705825 to 708792 13026 mRNA_4659: 13027 - KOG1134 Uncharacterized conserved protein, at 709545 to 713167 13027 mRNA_4660: 13028 - Interpro Transcription-silencing protein, cryptic loci regulator Clr2, at 713553 to 716343 13028

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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708,664 + -0.9
708,686 + -0.1
708,763 - 0.5
708,859 - 0.2
708,962 + 0.3
708,971 - 1.0
708,971 - 0.5
708,977 + 0.9
708,982 + -0.1
708,984 - 1.7
708,993 - -0.3
708,995 + -0.6
708,995 - 1.3
708,995 - 0.9
708,996 - -2.1
708,998 + 1.2
709,007 + 0.5
709,011 + -1.6
709,022 + 0.0
709,028 + 2.5
709,047 + -1.7
709,055 + 2.3
709,061 - -1.5
709,062 + -1.2
709,077 - -2.1
709,077 - 0.3
709,079 + 0.2
709,082 - 0.8
709,104 - 0.4
709,115 + -0.5
709,117 + -1.5
709,119 - 0.3
709,120 + -0.5
709,125 - 0.5
709,128 + -1.4
709,137 - 1.2
709,146 + -1.4
709,187 - 0.5
709,192 + 0.3
709,207 + -0.7
709,207 - -0.5
709,214 + -1.0
709,219 - -1.4
709,219 + 0.5
709,224 + -0.2
709,226 + -0.5
709,230 + -1.1
709,231 - -0.3
709,254 - 1.5
709,256 - -0.0
709,258 + 0.5
709,259 + -1.4
709,261 - -0.6
709,261 - -2.9
709,267 + 0.3
709,267 - 0.0
709,268 + 0.1
709,268 + 1.5
709,269 + -0.5
709,275 + 0.0
709,278 - -0.3
709,279 - -1.6
709,288 - -0.4
709,289 + -0.3
709,289 + -0.6
709,294 + 0.0
709,295 - -2.3
709,305 + 0.0
709,306 - 0.2
709,307 - 0.8
709,310 - -1.1
709,311 - 0.4
709,312 + 0.8
709,336 + 0.1
709,419 - 0.4
709,452 - 1.0
710,141 - 13027 mRNA_4659 0.16 0.0
711,453 - 13027 mRNA_4659 0.53 -0.7
712,599 + 13027 mRNA_4659 0.84 -1.3
712,884 - 1.0
712,901 - 0.7
712,918 - -0.9
712,932 + 2.2
713,060 + -0.1
713,213 + 0.6
713,215 + -0.1
713,216 - 0.9
713,216 - -0.4
713,223 + 2.0
713,225 - -0.1
713,239 + 1.2
713,244 - 0.4
713,249 - -0.7
713,249 - 1.1
713,301 + -1.2
713,303 + 0.1
713,312 - 1.1
713,326 - 2.0
713,328 - -0.5
713,329 - -1.9
713,331 + -1.3
713,331 + 0.5
713,341 + -2.8
713,348 - 0.4
713,351 + -0.2
713,360 - -2.8
713,367 + 1.3
713,382 - 0.2
713,391 + 0.2
713,487 - 0.2
713,523 - 2.3
713,530 - -0.8
713,695 - 0.5
713,990 - 13028 mRNA_4660 0.16 -1.1
714,137 + 13028 mRNA_4660 0.21 -1.2