Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4658

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4657: 13025 - Hypothetical Protein, at 704703 to 705380 13025 mRNA_4658: 13026 - Hypothetical Protein, at 705825 to 708792 13026 mRNA_4659: 13027 - KOG1134 Uncharacterized conserved protein, at 709545 to 713167 13027

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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704,848 + 13025 mRNA_4657 0.21 1.0
705,128 - 13025 mRNA_4657 0.63 2.6
705,134 + 13025 mRNA_4657 0.64 0.4
705,148 - 13025 mRNA_4657 0.66 -0.5
705,160 + 13025 mRNA_4657 0.67 -2.4
705,565 - -0.3
705,580 - -1.0
705,580 + 1.4
705,584 + -1.5
705,585 + -0.5
705,585 + -0.1
705,586 - 0.2
705,618 + 0.9
705,626 + -0.3
705,705 + -1.7
705,709 - -0.8
705,724 - -0.3
705,746 + -0.4
705,752 - -1.4
705,804 - -0.3
705,842 - -0.2
705,865 + 0.6
705,865 + 0.5
705,873 + 1.7
706,034 - 0.1
706,139 + 13026 mRNA_4658 0.11 0.3
706,158 - 13026 mRNA_4658 0.11 0.2
706,177 + 13026 mRNA_4658 0.12 1.4
706,328 + 13026 mRNA_4658 0.17 -1.4
706,577 - 13026 mRNA_4658 0.25 -1.5
706,588 - 13026 mRNA_4658 0.26 -0.4
706,604 + 13026 mRNA_4658 0.26 -0.1
706,611 + 13026 mRNA_4658 0.26 -0.9
706,622 + 13026 mRNA_4658 0.27 0.4
706,625 + 13026 mRNA_4658 0.27 0.3
706,627 + 13026 mRNA_4658 0.27 -0.5
706,743 + 13026 mRNA_4658 0.31 -2.1
706,753 + 13026 mRNA_4658 0.31 0.0
706,755 + 13026 mRNA_4658 0.31 0.8
706,756 - 13026 mRNA_4658 0.31 -1.1
706,759 - 13026 mRNA_4658 0.31 0.0
706,777 - 13026 mRNA_4658 0.32 -0.6
706,777 - 13026 mRNA_4658 0.32 0.8
706,911 + 13026 mRNA_4658 0.37 -0.6
706,912 - 13026 mRNA_4658 0.37 -1.4
706,913 - 13026 mRNA_4658 0.37 0.9
706,941 + 13026 mRNA_4658 0.38 -0.4
707,055 + 13026 mRNA_4658 0.41 -0.3
707,064 + 13026 mRNA_4658 0.42 0.2
707,064 + 13026 mRNA_4658 0.42 0.5
707,066 + 13026 mRNA_4658 0.42 0.1
707,388 - 13026 mRNA_4658 0.53 1.1
707,518 + 13026 mRNA_4658 0.57 0.1
707,627 - 13026 mRNA_4658 0.61 0.2
707,659 + 13026 mRNA_4658 0.62 -0.8
707,788 + 13026 mRNA_4658 0.66 0.9
707,950 + 13026 mRNA_4658 0.72 0.7
708,063 - 13026 mRNA_4658 0.75 -0.6
708,068 - 13026 mRNA_4658 0.76 -0.0
708,238 - 13026 mRNA_4658 0.81 -1.2
708,269 + 13026 mRNA_4658 0.82 -0.5
708,360 + 13026 mRNA_4658 0.85 -0.0
708,378 - 13026 mRNA_4658 0.86 1.1
708,512 - -0.9
708,527 + 0.1
708,664 + -0.9
708,686 + -0.1
708,763 - 0.5
708,859 - 0.2
708,962 + 0.3
708,971 - 1.0
708,971 - 0.5
708,977 + 0.9
708,982 + -0.1
708,984 - 1.7
708,993 - -0.3
708,995 + -0.6
708,995 - 1.3
708,995 - 0.9
708,996 - -2.1
708,998 + 1.2
709,007 + 0.5
709,011 + -1.6
709,022 + 0.0
709,028 + 2.5
709,047 + -1.7
709,055 + 2.3
709,061 - -1.5
709,062 + -1.2
709,077 - -2.1
709,077 - 0.3
709,079 + 0.2
709,082 - 0.8
709,104 - 0.4
709,115 + -0.5
709,117 + -1.5
709,119 - 0.3
709,120 + -0.5
709,125 - 0.5
709,128 + -1.4
709,137 - 1.2
709,146 + -1.4
709,187 - 0.5
709,192 + 0.3
709,207 + -0.7
709,207 - -0.5
709,214 + -1.0
709,219 - -1.4
709,219 + 0.5
709,224 + -0.2
709,226 + -0.5
709,230 + -1.1
709,231 - -0.3
709,254 - 1.5
709,256 - -0.0
709,258 + 0.5
709,259 + -1.4
709,261 - -0.6
709,261 - -2.9
709,267 + 0.3
709,267 - 0.0
709,268 + 0.1
709,268 + 1.5
709,269 + -0.5
709,275 + 0.0
709,278 - -0.3
709,279 - -1.6
709,288 - -0.4
709,289 + -0.3
709,289 + -0.6
709,294 + 0.0
709,295 - -2.3
709,305 + 0.0
709,306 - 0.2
709,307 - 0.8
709,310 - -1.1
709,311 - 0.4
709,312 + 0.8
709,336 + 0.1
709,419 - 0.4
709,452 - 1.0